Insertion junction: CLIP2.016882_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016882
Chromosome:chromosome 6
Location:6417403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293516 DEGO2 (1 of 4) PTHR22939:SF83 - PROTEASE DO-LIKE 2, CHLOROPLASTIC; Inactive Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTAGCCTTGCCGCACGTGGCTCACGGGGCCTGGCCCACACTTTCCCAC
Internal bar code:GCCTCGCGTTTTGGCTACCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACAACCTCCTCCTCC
Suggested primer 2:ATCTACTGCTGCTACTGCCG