Insertion junction: CLIP2.016886_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016886
Chromosome:chromosome 7
Location:5532868
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g351550 (1 of 1) PTHR31319//PTHR31319:SF1 - FAMILY NOT NAMED // CCT MOTIF FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTAGCAAGCCGTCGGCCACCTGCGCGCTCCAGCGTCACAGAGTCGCAG
Internal bar code:GAAAAAAGTATGAGCATTGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:454
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACCGGATGTCCATCGAG
Suggested primer 2:TGCTGGGTCATCTGCAGAAG