Insertion junction: CLIP2.016887_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016887
Chromosome:chromosome 8
Location:4451799
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00123723

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGAGGGGAGGCATGGTGTTGACAGCAGCCACGCGCCCGAGGAAACA
Internal bar code:AAGGTGTTGCTCGTATTTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3376
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAAGCACAACTGGTCGG
Suggested primer 2:GCGCATGCAGTCGTTTCTAG