Insertion junction: CLIP2.016895_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016895
Chromosome:chromosome 12
Location:4054488
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516400 SPL24 Pre-mRNA splicing factor; (1 of 1) PF04146 - YT521-B-like domain (YTH) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGGGGGCCCCACACGGTGCACACACATACACACATGTGTCAGTGTCCT
Internal bar code:TAGGTGGTTTGTCGCTTTCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:266
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CATGACCATGATGCAGCAGC
Suggested primer 2:GATTCCGCCTCTACGTCCTG