Insertion junction: CLIP2.016898_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.016898
Chromosome:chromosome 12
Location:2695853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00077901

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCTGCCATCCCAAACCTGACCCAACCCTGACGACCCAACCCTGCCCCA
Internal bar code:GGAGGGTCGTTGACCGGTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2123
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAATGATGTCATTCGCCC
Suggested primer 2:CACAGCCACCAACACACATG