Insertion junction: CLIP2.016900_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.016900
Chromosome:chromosome 12
Location:1447711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488351 (1 of 1) IPR001368//IPR009030//IPR011641 - TNFR/NGFR cysteine-rich region // Insulin-like growth factor binding protein, N-terminal // Tyrosine-protein kinase ephrin type A/B receptor-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCACCGGGCCACGGCACCGGCAGCGCGGCATGCGCCTGGCTTCACTTG
Internal bar code:GATGGGTGGGGGGGACGGAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:978
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:ATGATCAGCTGCGTACCTCG
Suggested primer 2:AGGGCCCACTCACCTAAGAT