Insertion junction: CLIP2.016906_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016906
Chromosome:chromosome 10
Location:4917173
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453800 TSP3,CTPA3,TCP3 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2; putative Sphingomyelin phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGTTGTTGGAGCAGCTTCTGTCGCCGCTGGTTCTACAGCCGGACCG
Internal bar code:GGGGGCCGGTTAATATAGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3152
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAAAGATACGTGAGCGCG
Suggested primer 2:GTTCTGGGCTGCAAACAAGG