Insertion junction: CLIP2.016910_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016910
Chromosome:chromosome 3
Location:1113857
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148750 CLH1 Chlorophyllase I; (1 of 1) PTHR33428:SF2 - CHLOROPHYLLASE-1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTACCCCAAGTTCTGGGGCGCTCTGGCGCCCGGCTCCTGGCAGATGGTG
Internal bar code:TCGCGGACGGTTAGATCTGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2173
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AACCAAGCAACCGTGAATGC
Suggested primer 2:TCTCGCTTTCCTCCACACAC