Insertion junction: CLIP2.016911_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016911
Chromosome:chromosome 3
Location:4530021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800334 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGACTAGGCGGCATCGGCGACGGCGGCTCCGGAGATGGAGGCTCAGGG
Internal bar code:CAATCGGGATCATTTTTAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1141
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGGTGAGAAGTGTCACG
Suggested primer 2:GCGAAGACAGATGCGGACTA