Insertion junction: CLIP2.016913_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016913
Chromosome:chromosome 10
Location:3426988
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444150 (1 of 2) IPR007743//IPR027417//IPR030385 - Immunity-related GTPases-like // P-loop containing nucleoside triphosphate hydrolase // IRG-type guanine nucleotide-binding (G) domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGGCTGCCTCACTTCGAGTCGGAGAAATATAACATCGCCTTCGTTGGG
Internal bar code:CCCTGACTTCTTATATACGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3889
LEAP-Seq percent confirming:98.75
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTGCATGCGTGTGTATG
Suggested primer 2:GGTTTCCTGTCGAGCAAGGA