Insertion junction: CLIP2.016917_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016917
Chromosome:chromosome 4
Location:1344929
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214501 PNP1,PNT2 Chloroplast polyribonucleotide phosphorylase; (1 of 1) 2.7.7.8 - Polyribonucleotide nucleotidyltransferase / Polynucleotide phosphorylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACACGGCTGCGTCTTTCCCTTCCTTCCCTTCTTCGTAAATCTACCACA
Internal bar code:GGACAAATTCCAATTAGCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:621
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAACCCTCTGAACTGCTC
Suggested primer 2:GTACACGCACACACACACAC