Insertion junction: CLIP2.016927_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016927
Chromosome:chromosome 1
Location:2618871
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015600 (1 of 1) PTHR23346//PTHR23346:SF7 - TRANSLATIONAL ACTIVATOR GCN1-RELATED // TRANSLATIONAL ACTIVATOR GCN1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGCGGTGAGCACCTGCGTCACGCAGCCGGGGTGCACCTCCAGGCCGG
Internal bar code:AAAGCCTGAGATGTCGTTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:870
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCACCTTACCCGCCCAT
Suggested primer 2:GGGTGTGTGTAGAAGTGGGG