Insertion junction: CLIP2.016928_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016928
Chromosome:chromosome 2
Location:1098212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g080600 BIP2 (1 of 2) K09490 - heat shock 70kDa protein 5 (HSPA5, BIP); Endoplasmic reticulum associated Hsp70 protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAGGTGTGGGGAGCGGCGGCATGGCGCATGGAGGTCAGGGCTGGACAC
Internal bar code:CATTTTCAAAAATAAATAATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:769
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGTATACTGGATGCCCAC
Suggested primer 2:CTCATAATTGCGCACCCTGC