Insertion junction: CLIP2.016935_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.016935
Chromosome:chromosome 16
Location:4850460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687301 SRH26 (1 of 1) K15192 - TATA-binding protein-associated factor [EC:3.6.4.-] (BTAF1, MOT1); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGCTTCGCGTGTCGCTTCCACCAGGCATCATACTGGCGGTGCTTGCT
Internal bar code:GTGATAGACCAACATGCTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:817
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CACCATCACCCAGTTCCCTC
Suggested primer 2:AACACAAACGCTCAACTCGC