Insertion junction: CLIP2.016963_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016963
Chromosome:chromosome 3
Location:6288113
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g191900 (1 of 1) K11840 - ubiquitin carboxyl-terminal hydrolase 9/24 [EC:3.4.19.12] (USP9_24) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGGCATGTCACCAGCGCGTTGGCTTCCGTTGTCCCGCCGTCAAATCG
Internal bar code:TCTGGGAGCGACAATTGTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:313
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CATCACCAGTAGCACCAGCA
Suggested primer 2:CAGTCGCATAGCAACACAGC