Insertion junction: CLIP2.016976_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.016976
Chromosome:chromosome 8
Location:216344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358555 (1 of 2) PTHR10625//PTHR10625:SF131 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCTGGTGCCGCCCCACCGACCTACACCTACCTCCAACCCCTCCTCAG
Internal bar code:GAAATGGTGAAAATTATTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:133
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CATCACACTCCCCCTTTCCC
Suggested primer 2:TTTACTCTGGGGCTTTGGGC