Insertion junction: CLIP2.016985_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.016985
Chromosome:chromosome 6
Location:3623098
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00179413

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTGTGCAATCACAGCCGCCCACTAAGTAAGCCGCTCGCTGACACACCG
Internal bar code:TATTCGGCAGCGTAATTTTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3871
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ATACAGCGCGAGTACTGAGC
Suggested primer 2:CCAATCACCACCACCATCCA