Insertion junction: CLIP2.016987_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.016987
Chromosome:chromosome 3
Location:2973890
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163150 (1 of 2) K09955 - hypothetical protein (K09955) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCGAAGCCCACAATCTGTATGCGAGGCACGTGACGGAATTGTAGGC
Internal bar code:TTATTAGAATTTAGAGGCCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:567
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CACGACACAACACACGTCAC
Suggested primer 2:CGTAGTGGTCGGCGTAGTAC