Insertion junction: CLIP2.016992_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.016992
Chromosome:chromosome 8
Location:3472225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378700 (1 of 2) K13173 - arginine and glutamate-rich protein 1 (ARGLU1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTAGTCTGCTAGTCAAAACGTGCGCGCGTCTGTTACTCGCGAACCCCC
Internal bar code:GGGTTTGCAACGAGGGTTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACACCGACTATCCGACT
Suggested primer 2:AGTGTGGATGGGATGGCTTG