Insertion junction: CLIP2.017000_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017000
Chromosome:chromosome 10
Location:2163764
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433450 (1 of 1) PTHR22844//PTHR22844:SF125 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGCAGTATGCGCTCGGAGAGGCTTGGGGAGGAAGCCTTTGGGCTCCT
Internal bar code:ATTAGCTACAAATGCGTACCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1032
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAAGCAGCCATACACCAG
Suggested primer 2:GCCATGGAGCTTGATGAGGA