Insertion junction: CLIP2.017004_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017004
Chromosome:chromosome 7
Location:1465866
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323900 PPP28 (1 of 2) PTHR12210//PTHR12210:SF68 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // SUBFAMILY NOT NAMED; Phosphoprotein phosphatase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATGCGCGATGCGAGCGCGCTGCACGAGGGCACACGCACGCCGGGGGGT
Internal bar code:ACTGGTCTCTAAGCTTGTCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5688
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCTCTACCGGCATCGTC
Suggested primer 2:GCGCACTCCATTTTGTGTGT