Insertion junction: CLIP2.017007_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017007
Chromosome:chromosome 12
Location:7933779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g553000 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTAAGCATGGTGCACGTGCAGCGGCACGCAGTTGCTATTAATGCGTT
Internal bar code:CTCCTATTGGGGTAATAAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2726
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGAGGGCAGGAGTAGACT
Suggested primer 2:ACAGGGGCAATTCCATCTGG