Insertion junction: CLIP2.017016_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017016
Chromosome:chromosome 12
Location:1234537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490050 TPT18,GMT1,TPT19 (1 of 3) K15356 - GDP-mannose transporter (VRG4, GONST1); Putative GDP-mannose transporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCCGGCCCTACCGCGTGCTTGTTCAGCAGCACCATGGACGCTGAGGC
Internal bar code:CGATGATATTTTCTGACCAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2689
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGACGCAGGTAGGTTTGT
Suggested primer 2:GGCCACGAAGATGAGGTTCA