Insertion junction: CLIP2.017022_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017022
Chromosome:chromosome 12
Location:3202588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500050 (1 of 19) PF00397 - WW domain (WW) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATTTACGCAGTTCTGGGGTGCGTGACACCGCGGCTGAACCGTTTCCCT
Internal bar code:CGATGTAAATGAGATTATCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1374
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGAACTGTAACGACCACA
Suggested primer 2:CTGGTTTGGTGTTGTGCTCG