Insertion junction: CLIP2.017028_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017028
Chromosome:chromosome 17
Location:1005994
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703176 MSD5 (1 of 5) K04564 - superoxide dismutase, Fe-Mn family (SOD2); Mn superoxide dismutase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACACACATACACATACACACACATCCACAAGCAATGCGTGCGGA
Internal bar code:ATCTGTGGCCTGTGGGCATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:144
LEAP-Seq percent confirming:2.63158
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:37
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GAACCACGAGCTGTTCTGGA
Suggested primer 2:CAAAACAAACGCACGCAACC