Insertion junction: CLIP2.017036_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017036
Chromosome:chromosome 7
Location:2289458
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g327800 (1 of 2) K05681 - ATP-binding cassette, subfamily G (WHITE), member 2 (ABCG2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACGGTCAGGCCCTGCATGCGTTCCAATGTTAGTTGCACAGACGTCGC
Internal bar code:GACGTATACACGTGCGATATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2793
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCGGCCCTTCACATAGGA
Suggested primer 2:ATCAGCACCAAGGCAGTACC