Insertion junction: CLIP2.017047_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017047
Chromosome:chromosome 13
Location:73003
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562300 HON2 Histone H1; (1 of 3) K11275 - histone H1/5 (H1_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTGCTTATCTACAGTACTTGGCCATCGGGGTTCACACCTTCGCACATG
Internal bar code:TTAGATTCATATTTAGCACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:768
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACAACTCCGT
Suggested primer 2:CCGGACTCTCGTATTCCTGC