Insertion junction: CLIP2.017049_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017049
Chromosome:chromosome 11
Location:2865608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095045 (1 of 1) PF00628//PF13871//PF13872 - PHD-finger (PHD) // C-terminal domain on Strawberry notch homologue (Helicase_C_4) // P-loop containing NTP hydrolase pore-1 (AAA_34) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCTCCGTTAGGCTCAGCCCTACCACCACGCGCGTGTGCGAGTCTTGA
Internal bar code:ATTCCGGGCCGTCGAGGTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4702
LEAP-Seq percent confirming:89.7196
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:107

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCAATCAAACGTGCCCAC
Suggested primer 2:CTGAGTATAGGCGCCACCAG