Insertion junction: CLIP2.017050_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017050
Chromosome:chromosome 1
Location:3128265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019950 DNJ7 (1 of 1) PTHR24078:SF294 - DNAJ PROTEIN HOMOLOG 1; DnaJ-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAACTGGTCGTAGATTTGGCGCTTCTCCGGGTCAGAGAGCACATCTG
Internal bar code:CCAAAATGTACTTCATTCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1756
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCACTTTGTTGGCCCGTG
Suggested primer 2:CCATTCCCACCTTCTTCCCC