Insertion junction: CLIP2.017061_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017061
Chromosome:chromosome 16
Location:1386601
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652050 ZXE3 (1 of 1) PTHR13789//PTHR13789:SF234 - MONOOXYGENASE // SUBFAMILY NOT NAMED; Putative zeaxanthin epoxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAGGTGCTGGCTCCGGTAGCCACCCTTGGCTCCATCATGCCCACACG
Internal bar code:AATCTGCTCTTTGATTACTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1610
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAAAACACACCACGTCCG
Suggested primer 2:ACACATTGGTACACTCGCGT