Insertion junction: CLIP2.017062_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017062
Chromosome:chromosome 3
Location:5605674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185750 (1 of 1) IPR003613//IPR013083 - U box domain // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATGCCCACGCACCGGACTGTACGGCAGTGGCAGTACAAAGCGACCCAC
Internal bar code:TATTGATCCTCAAGAAACTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:103
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGATGGGTGGGTGCATAA
Suggested primer 2:GTCACAGCAAACCAGCACAG