Insertion junction: CLIP2.017068_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017068
Chromosome:chromosome 14
Location:2490844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g624201 (1 of 1) PTHR10438//PTHR10438:SF247 - THIOREDOXIN // THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATGATGCACATGATCGCCACAAAATTGCGGGTTGTCGCACGCAAACG
Internal bar code:GCTTTATACCTAGGGCCTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2716
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGGAACTGCAACAGTGG
Suggested primer 2:TGCACCGTGTAGGAAGTTCC