Insertion junction: CLIP2.017070_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017070
Chromosome:chromosome 17
Location:3265070
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721850 SSA16 cilia-sensing, structure and/or assembly; (1 of 1) K08292 - elongation factor 2 kinase (EEF2K) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCGTACCTGCAAGGAGGCAAGAGCAAAGAGACTAACTAGACTATGCGA
Internal bar code:CATGTTTTGCTGACAAGTTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:221
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTTCTGCATCATTCCTGC
Suggested primer 2:CTGATAGTGATGACCCCGCC