Insertion junction: CLIP2.017079_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017079
Chromosome:chromosome 17
Location:1180267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704450 (1 of 4) PTHR12298//PTHR12298:SF7 - PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGCTGCAGCTGCTCTGATACCATTGCGCCAGTGGCCTTTTCCCTCAG
Internal bar code:GTTACGACGCTAGAGAGTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:4275
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTTAACGCTTGGTGCAAA
Suggested primer 2:CCAGTTCTTGCATCGCCATG