Insertion junction: CLIP2.017085_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017085
Chromosome:chromosome 11
Location:3399425
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477100 FAP97 (1 of 1) IPR003882//IPR029488 - Pistil-specific extensin-like protein // KIAA1430 homologue; Flagellar Associated Protein 97 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTCGTAACTGTTATCAACAAACCACCACCACCACCTCCACTACCACCA
Internal bar code:TGGTTCGTTACCTAGCAAGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:237
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGACGGGGAGAAGAGGAGTC
Suggested primer 2:AGGAGGATTTTGAGCCCACG