Insertion junction: CLIP2.017095_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017095
Chromosome:chromosome 10
Location:5134573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455400 RME2 (1 of 1) 2.1.1.223 - tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase; RNA methylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCCACCTCTTATACCTCAACAAACGCCCCACCCCACCTGCAACACC
Internal bar code:GTCAGGGCGACGGTGAGACTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1612
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGACGTGTGTGTTGGTTG
Suggested primer 2:GTGTGCATGCGTGTGTGAAT