Insertion junction: CLIP2.017096_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017096
Chromosome:chromosome 10
Location:5336130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456800 (1 of 2) PF09733 - VEFS-Box of polycomb protein (VEFS-Box) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGGCCGTGCTCGCGGGCAAACTCCAGGCACCTGCAGGCGGCGAGCGT
Internal bar code:CGGTTACATTTATGGTCGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3567
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTTGACCGGCATATGAC
Suggested primer 2:TTCCCCGTCCTCATCCTCAT