Insertion junction: CLIP2.017101_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.017101
Chromosome:chromosome 12
Location:7044673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560400 DNJ16 (1 of 1) PTHR24078:SF319 - DNAJ HOMOLOG SUBFAMILY C MEMBER 16; DnaJ-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGCCGCCCTCCGGCACCGCGCCCGCGCCCGCCCTGTCCGGCAGCTGC
Internal bar code:GCGATACACTCGGGCTTTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:436
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTACTCTTCTCCACCGG
Suggested primer 2:GATGTGCTGGGGCTGTTAGT