Insertion junction: CLIP2.017102_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017102
Chromosome:chromosome 6
Location:5408768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285600 MID,RWP5 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGAAAGCCCCGTCTTTGTGAGGAACGAAGTGGATGGCTTCCGCAGAAA
Internal bar code:GGAAGGTGTTGTGTTAACCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2169
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGACGATGCGCATCCTACTG
Suggested primer 2:ATGTGACGCAGACTCTGGTG