Insertion junction: CLIP2.017105_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017105
Chromosome:chromosome 9
Location:4980311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g405150 PUS1 RNA pseudouridine synthase; (1 of 2) PTHR11142//PTHR11142:SF0 - PSEUDOURIDYLATE SYNTHASE // TRNA PSEUDOURIDINE SYNTHASE-LIKE 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCGACCAAATCACTGCACCTGTACAGGAATCCGTTGCCGGTGACCTC
Internal bar code:TTGTGGCGTCTATGTGTCTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:314
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCTGTGTACGTTGGGCT
Suggested primer 2:CCGCTCATTACCCCTCGATC