Insertion junction: CLIP2.017111_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017111
Chromosome:chromosome 17
Location:6394292
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g743847 (1 of 1) IPR000504//IPR003613 - RNA recognition motif domain // U box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAACAATGACGCGGTTGCCTGTGCCATCTCTGCCACCACCTACCTGCCT
Internal bar code:TAACAAAAGGGCTCATGATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3078
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AAACATACCGCCAGCACCTT
Suggested primer 2:TCTCAGGATTCGGGGATGGT