Insertion junction: CLIP2.017121_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017121
Chromosome:chromosome 10
Location:5119315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455250 (1 of 6) PF02582 - Uncharacterised ACR, YagE family COG1723 (DUF155) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCCTTACGCCACCTATCCATCAACAGCCCGCACCTCAGCCCACCTCA
Internal bar code:AGCGAAAAGATGTCGGGCCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGGATGTTCGGGTGCAA
Suggested primer 2:AAGTGTGCAGTACGTCAGGG