Insertion junction: CLIP2.017125_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017125
Chromosome:chromosome 7
Location:3532831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCGGGACTTAACTTGATACCCCTGGCAGGGAGAACCTGTGAGCGGGT
Internal bar code:TTGTTTGTTATTGAATAGTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2430
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGTGAAGTACGGCAGT
Suggested primer 2:CGCATCCCACGTGTTTGTTT