Insertion junction: CLIP2.017138_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.017138
Chromosome:chromosome 2
Location:5436550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g114001 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTCGGGGGCTTGGAGAGGCGCCCGCGAGAATGCACGCGCGCCGGGAC
Internal bar code:CCCCTTCTAGGTGATAGGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1984
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGCTTGCCTCTTTTGCA
Suggested primer 2:TTCTGGTGGTGTCGGTGATG