Insertion junction: CLIP2.017159_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.017159
Chromosome:chromosome 12
Location:62388
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g483720 (1 of 2) PTHR10302//PTHR10302:SF8 - SINGLE-STRANDED DNA-BINDING PROTEIN // PROTEIN OSB2, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGCAGGGTGCCAAATGTATGGAAGTACATGCAGGTCTGGCCAATGGT
Internal bar code:AGGCTGATTTGGTTTATGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1623
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGTGTCTTGCCCTAGG
Suggested primer 2:CAAAGGCGACAAGTGTGGTG