Insertion junction: CLIP2.017159_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.017159
Chromosome:chromosome 12
Location:62389
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g483720 (1 of 2) PTHR10302//PTHR10302:SF8 - SINGLE-STRANDED DNA-BINDING PROTEIN // PROTEIN OSB2, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCACAAGCTCCCCTACACACACACACACACACACACACACACACACAC
Internal bar code:TACGTATTGTTAGTATCAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:5558
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGGCGACAAGTGTGGTG
Suggested primer 2:CAGGTGTGTCTTGCCCTAGG