Insertion junction: CLIP2.017170_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.017170
Chromosome:chromosome 14
Location:3467932
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630450 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTATGAAAGCCTATCACACGAAGGGATAGGTCGACCAGCAGGGGTGCA
Internal bar code:GCTTTTTGTGGCTGGTGCACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1259
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAAACAATAGCCCGCTCG
Suggested primer 2:CCCCTAACCTCCACACACAC