Insertion junction: CLIP2.017171_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017171
Chromosome:chromosome 9
Location:5608467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409801 (1 of 2) PTHR11373:SF4 - DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATGTGCGGCGTGGACATCGGCTGCAGCTTCCGGCGCCTGCTCATGCT
Internal bar code:CTCCGTCTTATAGAACCTAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:413
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCAGTAGGAGAGGGGAA
Suggested primer 2:CACAACACTGCACAGGAAGC