Insertion junction: CLIP2.017177_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.017177
Chromosome:chromosome 16
Location:860591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g647800 (1 of 1) IPR000104//IPR001932//IPR015655 - Antifreeze protein, type I // PPM-type phosphatase domain // Protein phosphatase 2C CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGATGGTGCCGTGTTCGTTGCTGGCGGCGGCCGCCGCCGCCGCCGCCA
Internal bar code:GGCAATAGCGGAAGGCAGACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1116
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACAACAACACCCGCAAC
Suggested primer 2:TCCGCTCGTTTTAGCTTGGT