Insertion junction: CLIP2.017179_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.017179
Chromosome:chromosome 17
Location:6581022
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00240417

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCAGCTAGTTTACGAACCTCTGCTTTACACAAATACTACCCGCGCTCT
Internal bar code:CGCGGGCTTTGTTAGATGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2138
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACGTGTCCATGCCACAG
Suggested primer 2:GGTTTGTGCACAAGCTGAGG